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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UVM rs117882290 chr20:30285215 T/C 0.000118 67 27.92 8.18 7.6 KM Plot
UVM rs118011592 chr20:30243742 C/T 0.000118 67 27.92 8.18 7.6 KM Plot
UVM rs118166235 chr12:53195211 G/A 9.52E-5 67 26.6 24.87 7.6 KM Plot
UVM rs11830365 chr12:9602261 T/C 0.000142 66 27.62 23.63 7.6 KM Plot
UVM rs11831679 chr12:132609960 C/T 4.25E-7 67 27.9 25.73 0.73 KM Plot
UVM rs11833316 chr12:132623019 G/A 5.35E-7 66 27.92 23.87 0.73 KM Plot
UVM rs11836451 chr12:132632910 T/G 4.1E-7 66 31.83 22.87 0.73 KM Plot
UVM rs11852479 chr15:40918826 G/T 1.26E-5 67 27.87 24.87 17.07 KM Plot
UVM rs11855517 chr15:40966430 T/C 1.64E-5 66 27.87 26.12 17.07 KM Plot
UVM rs11896543 chr2:239025367 C/T 4.67E-5 67 27.37 24.6 1.18 KM Plot
UVM rs11898344 chr2:239021690 G/T 4.67E-5 67 1.18 24.6 27.37 KM Plot
UVM rs11901532 chr2:239024425 T/G 4.67E-5 67 27.37 24.6 1.18 KM Plot
UVM rs11901818 chr2:239025315 A/T 4.67E-5 67 27.37 24.6 1.18 KM Plot
UVM rs11901853 chr2:239025345 A/G 4.67E-5 67 27.37 24.6 1.18 KM Plot
UVM rs11904159 chr2:239025630 T/C 4.67E-5 67 27.37 24.6 1.18 KM Plot